Literature Scanning January 2015

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  • Non-interacting surface solvation and dynamics in protein-protein interactions.

Visscher KM, Kastritis PL, Bonvin AA. Proteins. 2014 Dec 18 | PMID: 25524313 http://f1000.com/prime/pubmed/ref/25524313?emailType=ts

  • Verification and validation of bioinformatics software without a gold standard: a case study of BWA and Bowtie.

Giannoulatou E, Park S, Humphreys DT, Ho JW. BMC Bioinformatics. 2014 Dec 8; 15(Suppl 16):S15 | PMID: 25521810 http://f1000.com/prime/pubmed/ref/25521810?emailType=ts

  • Use B-factor related features for accurate classification between protein binding interfaces and crystal packing contacts.

Liu Q, Li Z, Li J. BMC Bioinformatics. 2014 Dec 8; 15(Suppl 16):S3 | PMID: 25522196 http://f1000.com/prime/pubmed/ref/25522196?emailType=ts

  • Evolutionary meandering of intermolecular interactions along the drift barrier.

Lynch M, Hagner K. Proc Natl Acad Sci U S A. 2014 Dec 22 | PMID: 25535374 http://f1000.com/prime/pubmed/ref/25535374?emailType=ts

  • Folding of an intrinsically disordered protein by phosphorylation as a regulatory switch.

Bah A, Vernon RM, Siddiqui Z, Krzeminski M, ..., Zhao C, Sonenberg N, Kay LE, Forman-Kay JD. Nature. 2014 Dec 22 | PMID: 25533957 http://f1000.com/prime/pubmed/ref/25533957?emailType=ts

  • Simultaneous Sequence-Based Prediction of the Statistical Populations of Ordered and Disordered Regions in Proteins.

Sormanni P, Camilloni C, Fariselli P, Vendruscolo M. J Mol Biol. 2014 Dec 19 | PMID: 25534081 http://f1000.com/prime/pubmed/ref/25534081?emailType=ts

  • Rapid evolution of virus sequences in intrinsically disordered protein regions.

Gitlin L, Hagai T, LaBarbera A, Solovey M, Andino R. PLoS Pathog. 2014 Dec; 10(12):e1004529 (1 Recommendation | Vladimir Uversky 02 Jan 2015) http://f1000.com/prime/article?articleId=725276205&emailType=ts

  • Visualizing the molecular recognition trajectory of an intrinsically disordered protein using multinuclear relaxation dispersion NMR.

Schneider R, Maurin D, Communie G, Kragelj J, Hansen DF, Ruigrok RW, Jensen MR, Blackledge M. J Am Chem Soc. 2014 Dec 31 http://f1000.com/prime/article?articleId=725289289&emailType=ts

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