User contributions
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- 13:18, 1 March 2016 (diff | hist) . . (+21) . . Bioinformatics and Systems Biology Research Proposal (current)
- 10:35, 4 February 2016 (diff | hist) . . (+19) . . Formal procedures during your master
- 10:33, 4 February 2016 (diff | hist) . . (+3) . . Formal procedures during your master
- 10:31, 4 February 2016 (diff | hist) . . (-15) . . Formal procedures during your master
- 10:30, 4 February 2016 (diff | hist) . . (+174) . . Formal procedures during your master
- 16:36, 17 December 2015 (diff | hist) . . (+2,392) . . N Forensic epigenetics using a bioinformatics approach (New page: {{Projectproposal |Contact person=Huub Hoefsloot |Contact person2=Dr. P.J. Verschure, SILS, UvA |Contact person3=Dr. Jana Naue |Master areas=Systems Biology, Bioinformatics |Fulfilled=No }...) (current)
- 12:04, 6 October 2015 (diff | hist) . . (-2) . . Bioinformatics student internship at Rijk Zwaan - food crop breeding (current)
- 11:33, 6 October 2015 (diff | hist) . . (+381) . . N Bioinformatics student internship at Rijk Zwaan - food crop breeding (New page: {{Projectproposal |Contact person=Anton Feenstra |Contact person2=Geo Velikkakam James |Fulfilled=No }} Open bioinformatics student internship positions at Rijk Zwaan. [http://www.rijkzw...)
- 06:44, 17 September 2015 (diff | hist) . . (-25) . . Research Questions in Bioinformatics (current)
- 16:03, 2 September 2015 (diff | hist) . . (+2,140) . . N MiRNA-target prediction in hepatitis B virus genome (New page: {{Projectproposal |Contact person=Anton Feenstra |Fulfilled=No }} MicroRNAs (miRNAs) are small, non-coding RNA molecules involved in various cellular processes of post-transcriptional reg...)
- 14:16, 26 August 2015 (diff | hist) . . (+18) . . Biology
- 14:16, 26 August 2015 (diff | hist) . . (-15) . . Biology
- 14:15, 26 August 2015 (diff | hist) . . (-798) . . Biology
- 13:32, 26 August 2015 (diff | hist) . . (+146) . . Bioinformatics Programming Classes
- 13:50, 7 July 2015 (diff | hist) . . (+375) . . N Galaxy pipeline for snp detection without reference sample (New page: {{Masterproject |Master name=Bioinformatics |Student name=Daniel de Koning |Project start date=2015/09/01 |Project end date=2015/12/31 |Supervisor=Andrew Stubbs |Second supervisor=Berry Kr...) (current)
- 15:42, 29 June 2015 (diff | hist) . . (+2,795) . . N Selecting docking conformations based on predicted interface and interaction strength (New page: {{Masterproject |Master name=Bioinformatics |Student name=Sije van der Veen |Project start date=2015/08/31 |Project end date=2016/01/28 |Supervisor=Qingzhen Hou |Second supervisor=Anton Fe...) (current)
- 13:58, 29 June 2015 (diff | hist) . . (+1) . . Genome wide association studies with paralogous gene sets for schizophrenia and bipolar disorder (current)
- 13:57, 29 June 2015 (diff | hist) . . (+1) . . Classifying psychiatric diseases (current)
- 13:57, 29 June 2015 (diff | hist) . . (+1) . . Estimating and decreasing technical biases in transcriptomic data (current)
- 13:57, 29 June 2015 (diff | hist) . . (+1) . . De novo contig assembly of metatranscriptomic NGS data to amend functional analysis (current)
- 13:56, 29 June 2015 (diff | hist) . . (+1) . . Predicting Protein Interaction Specificity using Sequence Harmony with Neighbour Support (current)
- 13:55, 29 June 2015 (diff | hist) . . (+1) . . MiRNAs in Fantom 5 (current)
- 13:55, 29 June 2015 (diff | hist) . . (+1) . . A practical method to characterize personal genome structure from whole genome sequence data (current)
- 13:55, 29 June 2015 (diff | hist) . . (+1) . . Modeling endothelial cell behavior using Petri nets: interactions between VE-cadherin and VEGFR-2 during angiogenesis (current)
- 13:55, 29 June 2015 (diff | hist) . . (+1) . . In the driver’s seat: Identification of significant mutations in cancer (current)
- 13:55, 29 June 2015 (diff | hist) . . (+1) . . Energy loss as a hemodynamic parameter for intracranial aneurysm rupture risk assessment. (current)
- 13:54, 29 June 2015 (diff | hist) . . (+1) . . Comparative genomics of Parasponia and Trema plants (current)
- 13:54, 29 June 2015 (diff | hist) . . (-97) . . Biological pathway data integration through enhancing BioPAX models (current)
- 13:11, 8 June 2015 (diff | hist) . . (+10) . . Formal procedures during your master
- 10:20, 8 June 2015 (diff | hist) . . (+142) . . Bioinformatics and Systems Biology Rules for Assignments and Exams (current)
- 10:16, 8 June 2015 (diff | hist) . . (+480) . . Bioinformatics and Systems Biology Rules for Assignments and Exams
- 08:17, 11 May 2015 (diff | hist) . . (+135) . . The role of the FBP-activatable LDH in the metabolism of Schistosoma Mansoni (current)
- 16:00, 15 April 2015 (diff | hist) . . (+214) . . Bioinformatics and Systems Biology Oral Exam (current)
- 15:58, 15 April 2015 (diff | hist) . . (-215) . . Bioinformatics and Systems Biology Oral Exam
- 15:57, 15 April 2015 (diff | hist) . . (-150) . . Bioinformatics and Systems Biology Master
- 16:29, 6 March 2015 (diff | hist) . . (+1) . . Checklist for new group members (current)
- 16:28, 6 March 2015 (diff | hist) . . (+69) . . Bioinformatics and Systems Biology Master
- 16:27, 6 March 2015 (diff | hist) . . (+1) . . Checklist for new group members
- 16:27, 6 March 2015 (diff | hist) . . (-3,119) . . Checklist for new group members (Replacing page with 'This page has been [http://wiki.cs.vu.nl/ibivu/index.php/Checklist_for_new_group_members moved to the IBIVU wiki] {{#externalredirect: http://wiki.cs.vu.nl/ibivu/index.php/Che...')
- 08:18, 3 February 2015 (diff | hist) . . (-9) . . Modelling the redox pathway in Trypanosoma brucei
- 08:18, 3 February 2015 (diff | hist) . . (-9) . . The role of the FBP-activatable LDH in the metabolism of Schistosoma Mansoni
- 15:12, 2 February 2015 (diff | hist) . . (+1,300) . . N Modelling the redox pathway in Trypanosoma brucei (New page: {{Projectproposal |Contact person=Jurgen Haanstra |Master areas=Systems Biology, Bioinformatics |Fulfilled=No }} Trypanosoma brucei is the causative agent of African Sleeping Sickness in h...)
- 15:11, 2 February 2015 (diff | hist) . . (+1,187) . . N The role of the FBP-activatable LDH in the metabolism of Schistosoma Mansoni (New page: {{Projectproposal |Contact person=Jurgen Haanstra |Master areas=Systems Biology, Bioinformatics |Fulfilled=No }} Schistosoma mansoni is a helminth that causes schistosomiasis in humans. It...)
- 15:09, 2 February 2015 (diff | hist) . . (+1,198) . . N Comparison of gene essentiality in genome-wide metabolic models of T. brucei and liver cells (New page: {{Projectproposal |Contact person=Jurgen Haanstra |Master areas=Systems Biology, Bioinformatics |Fulfilled=No }} Trypanosoma brucei is the causative agent of African Sleeping Sickness and ...)
- 15:08, 2 February 2015 (diff | hist) . . (+147) . . N Jurgen Haanstra (New page: {{Staffmember |Roomnumber=M2.54 |Homepage=http://www.aimms.vu.nl/en/people/h/haanstra.asp |Email=j.r.haanstra@vu.nl |Master areas=Bioinformatics }})
- 10:02, 13 October 2014 (diff | hist) . . (+62) . . m Presentation and Graduation dates Schedule (→Presentation Schedule Calendar) (current)
- 10:01, 13 October 2014 (diff | hist) . . (+159) . . Presentation and Graduation dates Schedule (→Presentation Schedule Calendar)
- 09:58, 13 October 2014 (diff | hist) . . (-4,653) . . Presentation and Graduation dates Schedule (→General Schedule)
- 09:13, 10 October 2014 (diff | hist) . . (0) . . N File:Bioinformatics and Systems Biology Course Scheme.pdf (current)
- 09:12, 10 October 2014 (diff | hist) . . (+19) . . Bioinformatics and Systems Biology Master
- 13:01, 17 September 2014 (diff | hist) . . (0) . . Bioinformatics Programming Classes
- 11:51, 2 September 2014 (diff | hist) . . (+286) . . Bioinformatics Programming Classes
- 08:17, 2 September 2014 (diff | hist) . . (+325) . . Bioinformatics and Systems Biology Rules for Assignments and Exams
- 14:02, 1 September 2014 (diff | hist) . . (-127) . . Biology
- 19:40, 16 July 2014 (diff | hist) . . (+3,325) . . N Fate decisions in stem cells (New page: {{Projectproposal |Contact person= Marijn van Loenhout [mailto:m.t.j.vanloenhout@gmail.com m.t.j.vanloenhout@gmail.com] |Contact person2=Anton Feenstra |Master areas=Bioinformatics |Projec...) (current)
- 14:13, 11 July 2014 (diff | hist) . . (+265) . . Bioinformatics and Systems Biology Research Proposal
- 14:11, 11 July 2014 (diff | hist) . . (+118) . . Bioinformatics and Systems Biology Research Proposal
- 13:54, 30 June 2014 (diff | hist) . . (+425) . . Bioinformatics and Systems Biology Rules for Assignments and Exams
- 09:16, 10 June 2014 (diff | hist) . . (+105) . . Formal procedures during your master
- 09:16, 10 June 2014 (diff | hist) . . (+85) . . Bioinformatics and Systems Biology Master
- 09:14, 10 June 2014 (diff | hist) . . (+160) . . Bioinformatics and Systems Biology Master
- 09:13, 10 June 2014 (diff | hist) . . (+293) . . Formal procedures during your master
- 08:49, 7 May 2014 (diff | hist) . . (+1,368) . . N Hotspots of Change in Brain Metabolism during Parkinson’s Disease (New page: {{Projectproposal |Contact person=Farahaniza Supandi |Contact person2=Hans van Beek |Master areas=Bioinformatics, Systems Biology |Fulfilled=No }} The aim of the project is to discover ‘...)
- 08:55, 7 March 2014 (diff | hist) . . (0) . . N File:InternshipContract-EN.doc (current)
- 08:53, 7 March 2014 (diff | hist) . . (+4) . . Bioinformatics Internship Contract (current)
- 08:53, 7 March 2014 (diff | hist) . . (+63) . . Bioinformatics Internship Contract
- 11:22, 13 February 2014 (diff | hist) . . (+1) . . Presentation and Graduation dates Schedule
- 16:19, 7 February 2014 (diff | hist) . . (+56) . . Visualizing physiological data: you need to see it to believe it (current)
- 16:18, 7 February 2014 (diff | hist) . . (+46) . . Predicting regulatory binding sites for anaerobic vs. aerobic respiration in P. denitrificans (current)
- 16:18, 7 February 2014 (diff | hist) . . (+41) . . Phylogenetic mapping of presynaptic protein interactions (current)
- 16:18, 7 February 2014 (diff | hist) . . (+42) . . Functional gene networks in Schizophrenia (current)
- 16:17, 7 February 2014 (diff | hist) . . (+44) . . Discovery of novel prostate cancer-associated genes (current)
- 16:17, 7 February 2014 (diff | hist) . . (+13) . . Coexpression analysis of potential prostate cancer biomarkers (current)
- 16:16, 7 February 2014 (diff | hist) . . (+44) . . Discovery of novel fusion events in PCa (current)
- 16:16, 7 February 2014 (diff | hist) . . (+96) . . Development of a method for the generation of GPCR-ligands libraries (current)
- 16:14, 7 February 2014 (diff | hist) . . (+79) . . Development and application of Genetic Algorithms to optimize conditions for cultivation of microorganisms (current)
- 16:14, 7 February 2014 (diff | hist) . . (+85) . . Creating a canonical prokaryotic biochemical pathway map (current)
- 16:13, 7 February 2014 (diff | hist) . . (+31) . . Coexpression analysis of potential prostate cancer biomarkers
- 16:13, 7 February 2014 (diff | hist) . . (+37) . . Analyzing and modeling cell contraction mechanisms during development of the frog Xenopus (current)
- 12:20, 28 January 2014 (diff | hist) . . (+2,724) . . N Easy processing of high-throughput microplate data (New page: {{Projectproposal |Contact person=Douwe Molenaar |Contact person2=Filipe Branco dos Santos |Master areas=Bioinformatics |Fulfilled=No }} Microplates (also erroneously called microtiter pla...)
- 12:18, 28 January 2014 (diff | hist) . . (+186) . . Douwe Molenaar
- 16:16, 20 January 2014 (diff | hist) . . (+10) . . Searching for schizophrenia genes: what can we learn from Mendelian disorders? (current)
- 16:15, 20 January 2014 (diff | hist) . . (+29) . . Searching for schizophrenia genes: what can we learn from Mendelian disorders?
- 16:15, 20 January 2014 (diff | hist) . . (+1,719) . . N Searching for schizophrenia genes: what can we learn from Mendelian disorders? (New page: {{Projectproposal |Contact person=Anton Feenstra |Contact person2=Eske Derks e.m.derks@amc.uva.nl |Fulfilled=No }} ==Time:== 6 months, date of starting in consultation with the student ...)
- 08:23, 8 January 2014 (diff | hist) . . (+38) . . Bioinformatics and Systems Biology Master
- 10:20, 7 January 2014 (diff | hist) . . (+237) . . Research Questions in Bioinformatics
- 09:44, 20 December 2013 (diff | hist) . . (+34) . . Thomas Binsl (current)
- 15:02, 19 December 2013 (diff | hist) . . (+35) . . Presentation and Graduation dates Schedule
- 15:29, 16 December 2013 (diff | hist) . . (+203) . . N Thomas Binsl (New page: {{Staffmember |Homepage=http://nl.linkedin.com/in/thomasbinsl |Master areas=Bioinformatics |Picture=picture.jpg }} www.clinicageno.com Clinicageno Ltd 11 Station Approach CR5 2NR Coulsdon...)
- 23:04, 10 December 2013 (diff | hist) . . (+45) . . Molecular basis of Body Integrity Identity Disorder (current)
- 23:02, 10 December 2013 (diff | hist) . . (+26) . . Molecular basis of Body Integrity Identity Disorder
- 22:59, 10 December 2013 (diff | hist) . . (-20) . . m Molecular basis of Body Integrity Identity Disorder
- 22:58, 10 December 2013 (diff | hist) . . (-1) . . Molecular basis of Body Integrity Identity Disorder
- 22:58, 10 December 2013 (diff | hist) . . (+1,897) . . N Molecular basis of Body Integrity Identity Disorder (New page: {{Projectproposal |Contact person=Rianne Blom <r.m.blom@amc.uva.nl> |Contact person2=Anton Feenstra |Master areas=Bioinformatics |Fulfilled=No }} ==Title:== Molecular basis of Body Integr...)
- 16:54, 20 November 2013 (diff | hist) . . (+129) . . Research Questions in Bioinformatics
- 16:52, 20 November 2013 (diff | hist) . . (+98) . . N File:ISMB Annika.pdf (Poster Annika Jacobsen at ISMB2013, Berlin, on Colon Cancer and the WNT/b-Catenin Petri net model.) (current)
- 09:15, 20 November 2013 (diff | hist) . . (+22) . . Research Questions in Bioinformatics
- 09:02, 20 November 2013 (diff | hist) . . (+81) . . Research Questions in Bioinformatics
- 08:59, 20 November 2013 (diff | hist) . . (-6) . . Research Questions in Bioinformatics
- 08:53, 20 November 2013 (diff | hist) . . (-181) . . Research Questions in Bioinformatics
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